miRNA display CGI


Results 1 - 12 of 12 are showing below:
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GenBank Identifier RefSeq Acc. Name
20153383 NC_003603.1 Groundnut rosette virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14805 + 2440 87 20.5 -21 NP_619714 5' arm      3' arm
14806 + 2723 86 20.5 -22.3 NP_619660 5' arm      3' arm
14807 + 3510 89 21.5 -19.9 5' arm      3' arm
14808 + 3810 90 21.5 -19.6 5' arm      3' arm
14809 - 332 90 21.5 -25 NP_619659 5' arm      3' arm
14810 - 1897 89 20 -25.2 NP_619714 5' arm      3' arm
14811 - 2574 87 22 -31 5' arm      3' arm
14812 - 2921 82 21 -23.4 NP_619660 5' arm      3' arm
14813 - 3020 90 19 -20.7 NP_619661 5' arm      3' arm
14814 - 3279 84 19.5 -24.1 NP_619661 5' arm      3' arm
14815 - 3471 89 20 -20 NP_619661 5' arm      3' arm
14816 - 3934 90 21 -21.7 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.