miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
29252	+	190998	87	23	-34.5	YP_068278		5' arm      3' arm
29251	+	186472	90	30.5	-34.5			5' arm      3' arm
29261	+	219657	88	23	-34.2	YP_068317		5' arm      3' arm
29187	+	103802	89	25.5	-33.7	YP_068200		5' arm      3' arm
29188	+	104167	88	25	-32.5	YP_068200		5' arm      3' arm
29355	-	214771	86	26	-32.1	YP_068308		5' arm      3' arm
29320	-	123684	74	19	-32			5' arm      3' arm
29245	+	171980	89	21.5	-31.8	YP_068256		5' arm      3' arm
29257	+	214685	88	26.5	-31.8	YP_068308		5' arm      3' arm
29178	+	89716	88	23.5	-31.52			5' arm      3' arm
29303	-	74436	90	24	-31.4	YP_068178		5' arm      3' arm
29264	+	220356	90	22	-31.1	YP_068317		5' arm      3' arm
29309	-	85224	89	22	-30.9	YP_068185		5' arm      3' arm
29259	+	217800	87	21	-30.4	YP_068314		5' arm      3' arm
29177	+	88815	90	23	-30.3	YP_068189		5' arm      3' arm
29237	+	156961	81	23	-30.1			5' arm      3' arm
29310	-	89804	90	23	-29.72			5' arm      3' arm
29241	+	161372	90	27.5	-29.7			5' arm      3' arm
29306	-	81569	88	19	-29.7	YP_068184		5' arm      3' arm
29190	+	106292	89	20.5	-29.6	YP_068202		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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