miRNA display CGI


Results 1 - 20 of 214 are showing below:
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GenBank Identifier RefSeq Acc. Name
15320570 NC_003085.1 Bacteriophage Mx8

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11508 + 47735 90 21.5 -28.7 NP_203496 5' arm      3' arm
11616 - 48040 90 19 -26 NP_203496 5' arm      3' arm
11615 - 46879 87 20.5 -22.2 NP_203495 5' arm      3' arm
11507 + 46483 90 22 -19.6 NP_203494 5' arm      3' arm
11614 - 46000 87 20.5 -26.1 NP_203492 5' arm      3' arm
11613 - 45256 88 19 -26.4 NP_203491 5' arm      3' arm
11506 + 45428 85 20.5 -22.4 NP_203491 5' arm      3' arm
11505 + 43917 88 19.5 -24.7 NP_203489 5' arm      3' arm
11612 - 43372 86 21 -24.4 NP_203489 5' arm      3' arm
11611 - 42784 90 19.5 -25.9 NP_203489 5' arm      3' arm
11504 + 43789 90 24 -23.5 NP_203489 5' arm      3' arm
11503 + 42966 85 19.5 -22 NP_203489 5' arm      3' arm
11501 + 41659 81 20 -28.3 NP_203488 5' arm      3' arm
11609 - 41658 88 19.5 -24.7 NP_203488 5' arm      3' arm
11610 - 42286 89 19.5 -31 NP_203487 5' arm      3' arm
11502 + 42198 89 20 -30.6 NP_203487 5' arm      3' arm
11608 - 41262 90 19.5 -20.2 NP_203486 5' arm      3' arm
11500 + 41199 90 20.5 -23.51 NP_203486 5' arm      3' arm
11607 - 40973 89 22 -20.8 NP_203485 5' arm      3' arm
11606 - 40634 89 20 -23.6 NP_203484 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.