miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11481	+	33588	83	19	-19.8	NP_203472		5' arm      3' arm
11532	-	9056	89	19	-27.6	NP_203432		5' arm      3' arm
11530	-	8816	87	19	-24.3	NP_203431		5' arm      3' arm
11415	+	3787	90	19	-21.5	NP_203422		5' arm      3' arm
11485	+	35230	90	19	-30.9	NP_203476		5' arm      3' arm
11483	+	34437	89	19	-21.5	NP_203474		5' arm      3' arm
11453	+	21061	90	19	-33	NP_203459		5' arm      3' arm
11597	-	37832	89	19	-21	NP_203478		5' arm      3' arm
11465	+	26208	87	19	-20.6	NP_203465		5' arm      3' arm
11586	-	32005	89	19	-24.4	NP_203471		5' arm      3' arm
11550	-	17404	88	19	-20.4	NP_203452		5' arm      3' arm
11463	+	25460	87	19	-25.2	NP_203464		5' arm      3' arm
11616	-	48040	90	19	-26	NP_203496		5' arm      3' arm
11451	+	20761	88	19	-26.1	NP_203459		5' arm      3' arm
11473	+	29699	86	19	-19.8	NP_203468		5' arm      3' arm
11572	-	26474	85	19	-21.1	NP_203465		5' arm      3' arm
11514	-	1433	90	19	-19.4	NP_203416		5' arm      3' arm
11434	+	12658	89	19	-24.2	NP_203438		5' arm      3' arm
11450	+	19190	89	19	-19.4	NP_203458		5' arm      3' arm
11613	-	45256	88	19	-26.4	NP_203491		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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