miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11443	+	17303	87	22.5	-26.2	NP_203452		5' arm      3' arm
11444	+	17418	89	20	-23.3	NP_203452		5' arm      3' arm
11445	+	17867	86	22	-22.7	NP_203455		5' arm      3' arm
11446	+	18033	90	26	-28.9	NP_203455		5' arm      3' arm
11447	+	18606	90	19.5	-30.7	NP_203457		5' arm      3' arm
11448	+	18812	89	20	-20.1	NP_203457		5' arm      3' arm
11449	+	19017	90	20.5	-27.3	NP_203458		5' arm      3' arm
11450	+	19190	89	19	-19.4	NP_203458		5' arm      3' arm
11451	+	20761	88	19	-26.1	NP_203459		5' arm      3' arm
11452	+	20969	90	22	-23.6	NP_203459		5' arm      3' arm
11453	+	21061	90	19	-33	NP_203459		5' arm      3' arm
11454	+	21555	90	21.5	-23.8	NP_203459		5' arm      3' arm
11455	+	21664	89	21.5	-23.4	NP_203459		5' arm      3' arm
11456	+	21904	88	23.5	-23.7	NP_203459		5' arm      3' arm
11457	+	24079	90	20.5	-34.7	NP_203462		5' arm      3' arm
11458	+	24249	90	19.5	-26.4	NP_203462		5' arm      3' arm
11459	+	24553	88	19.5	-23.8	NP_203462		5' arm      3' arm
11460	+	24651	87	21.5	-20.5	NP_203462		5' arm      3' arm
11461	+	25137	90	21.5	-26.5	NP_203463		5' arm      3' arm
11462	+	25367	82	20	-23.5	NP_203463		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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