miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
11483	+	34437	89	19	-21.5	NP_203474		5' arm      3' arm
11484	+	34829	88	21.5	-23.1	NP_203475		5' arm      3' arm
11485	+	35230	90	19	-30.9	NP_203476		5' arm      3' arm
11486	+	35420	90	21.5	-25.9			5' arm      3' arm
11487	+	35736	87	20.5	-25.6	NP_203477		5' arm      3' arm
11488	+	36199	89	19.5	-27.1	NP_203477		5' arm      3' arm
11489	+	36518	90	21	-23.1			5' arm      3' arm
11490	+	37087	89	20.5	-27.7	NP_203478		5' arm      3' arm
11491	+	37853	89	21.5	-20.9	NP_203479		5' arm      3' arm
11492	+	38313	89	21.5	-27.7	NP_203480		5' arm      3' arm
11493	+	38606	89	21	-26.5	NP_203480		5' arm      3' arm
11494	+	38831	87	22	-27.2	NP_203481		5' arm      3' arm
11495	+	39065	89	20.5	-25.5	NP_203481		5' arm      3' arm
11496	+	39156	87	20.5	-23.5	NP_203481		5' arm      3' arm
11497	+	39751	88	20	-24.4	NP_203482		5' arm      3' arm
11498	+	40059	90	20	-19.9	NP_203483		5' arm      3' arm
11499	+	40479	89	21.5	-23.4	NP_203484		5' arm      3' arm
11500	+	41199	90	20.5	-23.51	NP_203486		5' arm      3' arm
11501	+	41659	81	20	-28.3	NP_203488		5' arm      3' arm
11502	+	42198	89	20	-30.6	NP_203487		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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