miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
24461	+	94811	87	21.5	-19.4	NP_944424		5' arm      3' arm
24658	-	95531	87	19.5	-19.4	NP_944424		5' arm      3' arm
24409	+	56294	88	22	-19.4	NP_944409		5' arm      3' arm
24486	+	116358	86	20	-19.4	NP_944438		5' arm      3' arm
24361	+	25740	88	22	-19.4	NP_944392		5' arm      3' arm
24393	+	44843	88	20	-19.4	NP_944402		5' arm      3' arm
24707	-	128436	90	19.5	-19.44			5' arm      3' arm
24528	+	153736	90	19.5	-19.44			5' arm      3' arm
24706	-	128233	80	19.5	-19.5			5' arm      3' arm
24548	-	4813	88	21.5	-19.5			5' arm      3' arm
24458	+	93083	89	21.5	-19.5	NP_944423		5' arm      3' arm
24365	+	28241	90	19.5	-19.5	NP_944393		5' arm      3' arm
24620	-	70394	84	21.5	-19.5	NP_944411		5' arm      3' arm
24601	-	54457	88	22	-19.5			5' arm      3' arm
24529	+	153939	80	19.5	-19.5			5' arm      3' arm
24616	-	69013	90	19.5	-19.6	NP_944410		5' arm      3' arm
24720	-	133956	88	20.5	-19.6	NP_944442		5' arm      3' arm
24676	-	108934	88	19	-19.6	NP_944434		5' arm      3' arm
24396	+	47000	90	19.5	-19.7	NP_944402		5' arm      3' arm
24394	+	45756	87	19	-19.7	NP_944402		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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