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GenBank Identifier | RefSeq Acc. | Name |
33620426 | NC_005066.1 | Enterobacteria phage RB49 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22469 | + | 73203 | 89 | 24.5 | -27 | NP_891710 | 5' arm 3' arm | ||
22470 | + | 75252 | 90 | 19 | -19.9 | NP_891714 | 5' arm 3' arm | ||
22471 | + | 78066 | 90 | 19.5 | -23 | NP_891717 | 5' arm 3' arm | ||
22472 | + | 82185 | 89 | 22.5 | -23.6 | NP_891720 | 5' arm 3' arm | ||
22473 | + | 82484 | 90 | 20.5 | -25.4 | NP_891720 | 5' arm 3' arm | ||
22474 | + | 84541 | 88 | 23.5 | -24.1 | NP_891723 | 5' arm 3' arm | ||
22475 | + | 93491 | 90 | 19.5 | -24.9 | NP_891732 | 5' arm 3' arm | ||
22476 | + | 147954 | 90 | 27.5 | -21.5 | NP_891819 | 5' arm 3' arm | ||
22477 | + | 150165 | 86 | 19 | -25.2 | NP_891821 | 5' arm 3' arm | ||
22478 | - | 24131 | 86 | 19 | -21.7 | NP_891606 | 5' arm 3' arm | ||
22479 | - | 32861 | 86 | 21 | -22 | NP_891623 | 5' arm 3' arm | ||
22480 | - | 34565 | 89 | 20.5 | -21.3 | 5' arm 3' arm | |||
22481 | - | 45410 | 88 | 19 | -26.6 | 5' arm 3' arm | |||
22482 | - | 47803 | 87 | 19.5 | -22.5 | 5' arm 3' arm | |||
22483 | - | 84628 | 88 | 22 | -22.3 | NP_891723 | 5' arm 3' arm | ||
22484 | - | 92516 | 89 | 22 | -24.3 | NP_891731 | 5' arm 3' arm | ||
22485 | - | 96927 | 86 | 24 | -23.2 | NP_891735 | 5' arm 3' arm | ||
22486 | - | 155686 | 84 | 19.5 | -26.5 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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