miRNA display CGI


Results 1 - 10 of 10 are showing below:
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GenBank Identifier RefSeq Acc. Name
51010904 NC_003094.2 Helicoverpa armigera nuclear polyhedrosis virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11644 - 36065 86 24.5 -20.8 NP_203597 5' arm      3' arm
11645 - 81667 89 21 -20.6 NP_203643 5' arm      3' arm
11646 - 81829 89 21 -31.8 NP_203643 5' arm      3' arm
11647 - 100747 87 19 -24.4 NP_203662 5' arm      3' arm
11648 - 113695 88 21.5 -23 NP_203677 5' arm      3' arm
11649 - 120564 89 25 -24.1 NP_203685 5' arm      3' arm
11643 + 99602 88 20 -22.7 5' arm      3' arm
11642 + 73000 90 21 -23.4 NP_203635 5' arm      3' arm
11641 + 58467 89 28.5 -24.9 NP_203621 5' arm      3' arm
11640 + 50939 89 20 -27.6 NP_203615 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.