miRNA display CGI


Results 1 - 8 of 8 are showing below:
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GenBank Identifier RefSeq Acc. Name
22296522 NC_004112.1 Lactobacillus casei bacteriophage A2 virion

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16555 + 2048 89 19 -22.8 NP_680484 5' arm      3' arm
16556 + 10447 88 19 -21.3 NP_680494 5' arm      3' arm
16557 + 18903 76 22.5 -26.8 NP_680499 5' arm      3' arm
16558 + 32005 89 19 -23.7 NP_680517 5' arm      3' arm
16559 + 33081 84 20 -21.9 NP_680520 5' arm      3' arm
16560 + 38261 85 19.5 -24.9 NP_680533 5' arm      3' arm
16561 + 38416 89 19.5 -23.9 5' arm      3' arm
16562 - 21347 89 22.5 -29.2 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.