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GenBank Identifier | RefSeq Acc. | Name |
22296522 | NC_004112.1 | Lactobacillus casei bacteriophage A2 virion |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
16555 | + | 2048 | 89 | 19 | -22.8 | NP_680484 | 5' arm 3' arm | ||
16556 | + | 10447 | 88 | 19 | -21.3 | NP_680494 | 5' arm 3' arm | ||
16557 | + | 18903 | 76 | 22.5 | -26.8 | NP_680499 | 5' arm 3' arm | ||
16558 | + | 32005 | 89 | 19 | -23.7 | NP_680517 | 5' arm 3' arm | ||
16559 | + | 33081 | 84 | 20 | -21.9 | NP_680520 | 5' arm 3' arm | ||
16560 | + | 38261 | 85 | 19.5 | -24.9 | NP_680533 | 5' arm 3' arm | ||
16561 | + | 38416 | 89 | 19.5 | -23.9 | 5' arm 3' arm | |||
16562 | - | 21347 | 89 | 22.5 | -29.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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