miRNA display CGI


Results 1 - 18 of 18 are showing below:
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GenBank Identifier RefSeq Acc. Name
9635250 NC_002331.1 Xestia c-nigrum granulovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8723 + 44131 86 21 -24.6 NP_059201 5' arm      3' arm
8731 + 153765 85 23.5 -25.9 NP_059302 5' arm      3' arm
8730 + 149403 90 19.5 -23.3 NP_059299 5' arm      3' arm
8729 + 112027 74 21 -20.9 NP_059266 5' arm      3' arm
8728 + 111530 90 21 -32.3 NP_059266 5' arm      3' arm
8727 + 67936 89 20.5 -21.91 NP_059222 5' arm      3' arm
8726 + 66485 86 23 -22.3 NP_059221 5' arm      3' arm
8725 + 59089 90 19.5 -19.9 NP_059213 5' arm      3' arm
8724 + 44848 86 21 -22.4 NP_059203 5' arm      3' arm
8733 - 25383 84 20.5 -22.4 5' arm      3' arm
8734 - 44634 89 19.5 -21.7 NP_059202 5' arm      3' arm
8735 - 67423 73 19.5 -24.3 NP_059221 5' arm      3' arm
8736 - 111619 90 19 -27.3 NP_059266 5' arm      3' arm
8737 - 145763 89 24.5 -24.9 NP_059297 5' arm      3' arm
8738 - 152093 90 21 -28.3 NP_059300 5' arm      3' arm
8739 - 156428 84 19.5 -24.6 NP_059303 5' arm      3' arm
8740 - 157062 88 20 -21.6 NP_059303 5' arm      3' arm
8732 - 8185 90 25 -19.4 NP_059161 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.