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GenBank Identifier | RefSeq Acc. | Name |
9629189 | NC_001780.1 | Saguaro cactus virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
5070 | + | 603 | 90 | 21.5 | -27.5 | NP_044383 | 5' arm 3' arm | ||
5071 | + | 1537 | 85 | 19.5 | -26.6 | NP_044384 | 5' arm 3' arm | ||
5072 | + | 2670 | 87 | 25.5 | -27.3 | NP_044389 | 5' arm 3' arm | ||
5073 | - | 380 | 89 | 20.5 | -23.3 | NP_044382 | 5' arm 3' arm | ||
5074 | - | 839 | 88 | 19.5 | -20.45 | NP_044382 | 5' arm 3' arm | ||
5075 | - | 3178 | 90 | 23 | -23.8 | NP_044388 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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