miRNA display CGI


Results 1 - 8 of 8 are showing below:
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GenBank Identifier RefSeq Acc. Name
20153387 NC_003608.1 Hibiscus chlorotic ringspot virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14837 + 2836 74 25 -32.7 NP_619677 5' arm      3' arm
14840 - 621 85 20.5 -26.6 NP_619671 5' arm      3' arm
14841 - 971 88 23.5 -25.7 NP_619671 5' arm      3' arm
14834 + 305 89 19.5 -23.4 NP_619672 5' arm      3' arm
14838 + 3247 90 20 -23.3 NP_619676 5' arm      3' arm
14835 + 537 85 20.5 -22.5 NP_619672 5' arm      3' arm
14836 + 2096 84 25.5 -21.6 NP_619671 5' arm      3' arm
14839 - 515 88 22 -21.2 NP_619671 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.