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GenBank Identifier | RefSeq Acc. | Name |
9628705 | NC_001710.1 | GB virus C/Hepatitis G virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
4253 | + | 670 | 90 | 22.5 | -22.9 | NP_043570 | 5' arm 3' arm | ||
4254 | + | 794 | 90 | 23 | -30.8 | NP_043570 | 5' arm 3' arm | ||
4255 | + | 1483 | 89 | 22.5 | -20.8 | NP_043570 | 5' arm 3' arm | ||
4256 | + | 1635 | 82 | 23.5 | -29.8 | NP_043570 | 5' arm 3' arm | ||
4257 | + | 2009 | 90 | 23.5 | -22.7 | 5' arm 3' arm | |||
4258 | + | 2515 | 89 | 25 | -26.5 | NP_043570 | 5' arm 3' arm | ||
4259 | + | 2957 | 89 | 28 | -24.8 | NP_043570 | 5' arm 3' arm | ||
4260 | + | 3104 | 89 | 26.5 | -26.3 | NP_043570 | 5' arm 3' arm | ||
4261 | + | 3215 | 90 | 20.5 | -23.1 | NP_043570 | 5' arm 3' arm | ||
4262 | + | 3322 | 88 | 21.5 | -25.5 | NP_043570 | 5' arm 3' arm | ||
4263 | + | 3807 | 89 | 21 | -23.6 | NP_043570 | 5' arm 3' arm | ||
4264 | + | 4138 | 90 | 20 | -32.2 | NP_043570 | 5' arm 3' arm | ||
4265 | + | 4621 | 87 | 24 | -34.8 | NP_043570 | 5' arm 3' arm | ||
4266 | + | 4800 | 80 | 19.5 | -26 | NP_043570 | 5' arm 3' arm | ||
4267 | + | 5087 | 89 | 22 | -36 | NP_043570 | 5' arm 3' arm | ||
4268 | + | 5233 | 89 | 20 | -31 | NP_043570 | 5' arm 3' arm | ||
4269 | + | 5754 | 89 | 19.5 | -22.3 | NP_043570 | 5' arm 3' arm | ||
4270 | + | 6064 | 89 | 19.5 | -31.1 | NP_043570 | 5' arm 3' arm | ||
4271 | + | 6429 | 84 | 21 | -30.2 | NP_043570 | 5' arm 3' arm | ||
4272 | + | 6908 | 87 | 21.5 | -21.1 | NP_043570 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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