miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13588	-	36998	90	20	-21.4	NP_599085		5' arm      3' arm
13587	-	36755	88	25	-25.8	NP_599085		5' arm      3' arm
13586	-	34168	88	19.5	-23			5' arm      3' arm
13585	-	28451	90	20.5	-21.7	NP_599071		5' arm      3' arm
13584	-	24866	87	19	-20.9			5' arm      3' arm
13583	-	14721	89	19	-23.2	NP_599050		5' arm      3' arm
13582	-	14181	87	19	-24.6	NP_599049		5' arm      3' arm
13581	-	13898	89	19	-22	NP_599048		5' arm      3' arm
13580	-	12612	87	20.5	-26.3	NP_599047		5' arm      3' arm
13579	-	12477	89	22.5	-23	NP_599047		5' arm      3' arm
13578	-	9993	89	21	-27.2	NP_599046		5' arm      3' arm
13577	-	9471	90	19	-23.6	NP_599045		5' arm      3' arm
13576	-	8822	87	20.5	-20.6	NP_599043		5' arm      3' arm
13575	-	8604	85	20.5	-21.7	NP_599043		5' arm      3' arm
13574	-	8483	89	21	-26.3	NP_599043		5' arm      3' arm
13573	-	3194	90	19	-22	NP_599035		5' arm      3' arm
13572	-	1223	90	23	-22.5	NP_599034		5' arm      3' arm
13571	-	502	89	20.5	-22	NP_599033		5' arm      3' arm
13570	+	36385	88	19	-20.9	NP_599084		5' arm      3' arm
13569	+	36153	85	19.5	-25	NP_599083		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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