miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
13559	+	16762	90	20	-23.1	NP_599053		5' arm      3' arm
13560	+	24665	89	24.5	-25			5' arm      3' arm
13561	+	27143	87	19	-25.7	NP_599068		5' arm      3' arm
13562	+	27567	89	21	-28.2	NP_599069		5' arm      3' arm
13563	+	28362	90	22.5	-22.5	NP_599071		5' arm      3' arm
13564	+	28738	90	20.5	-22.2			5' arm      3' arm
13565	+	31854	90	23	-32.7	NP_599077		5' arm      3' arm
13566	+	31968	89	21.5	-25.1	NP_599077		5' arm      3' arm
13567	+	32417	90	19	-19.65	NP_599077		5' arm      3' arm
13568	+	34017	79	23.5	-33.2			5' arm      3' arm
13569	+	36153	85	19.5	-25	NP_599083		5' arm      3' arm
13570	+	36385	88	19	-20.9	NP_599084		5' arm      3' arm
13571	-	502	89	20.5	-22	NP_599033		5' arm      3' arm
13572	-	1223	90	23	-22.5	NP_599034		5' arm      3' arm
13573	-	3194	90	19	-22	NP_599035		5' arm      3' arm
13574	-	8483	89	21	-26.3	NP_599043		5' arm      3' arm
13575	-	8604	85	20.5	-21.7	NP_599043		5' arm      3' arm
13576	-	8822	87	20.5	-20.6	NP_599043		5' arm      3' arm
13577	-	9471	90	19	-23.6	NP_599045		5' arm      3' arm
13578	-	9993	89	21	-27.2	NP_599046		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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