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GenBank Identifier | RefSeq Acc. | Name |
81079705 | NC_007582.1 | Aquareovirus A segment 1 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
33242 | - | 1414 | 88 | 19.5 | -23.42 | YP_398629 | 5' arm 3' arm | ||
33243 | - | 2441 | 85 | 22 | -28.7 | YP_398629 | 5' arm 3' arm | ||
33244 | + | 3791 | 76 | 21 | -24.6 | YP_398630 | 5' arm 3' arm | ||
33245 | - | 3522 | 90 | 20.5 | -28.91 | YP_398630 | 5' arm 3' arm | ||
33246 | - | 97 | 90 | 21 | -23 | YP_398631 | 5' arm 3' arm | ||
33247 | - | 1564 | 90 | 20 | -23.7 | YP_398631 | 5' arm 3' arm | ||
33248 | - | 1855 | 89 | 22.5 | -28.2 | YP_398631 | 5' arm 3' arm | ||
33249 | - | 2109 | 89 | 21.5 | -20.94 | YP_398631 | 5' arm 3' arm | ||
33250 | - | 2730 | 87 | 21.5 | -21.9 | YP_398631 | 5' arm 3' arm | ||
33251 | - | 3562 | 90 | 20 | -20.3 | YP_398631 | 5' arm 3' arm | ||
33252 | - | 905 | 87 | 21.5 | -20.4 | YP_398632 | 5' arm 3' arm | ||
33253 | + | 2137 | 90 | 20 | -24.3 | YP_398633 | 5' arm 3' arm | ||
33254 | - | 1466 | 90 | 19.5 | -31.3 | YP_398633 | 5' arm 3' arm | ||
33255 | + | 1245 | 89 | 22 | -19.5 | YP_398634 | 5' arm 3' arm | ||
33256 | + | 795 | 90 | 19 | -24.8 | YP_398635 | 5' arm 3' arm | ||
33257 | + | 318 | 90 | 20 | -21.9 | YP_398637 | 5' arm 3' arm | ||
33258 | - | 638 | 90 | 21 | -21 | YP_398638 | 5' arm 3' arm | ||
33259 | + | 709 | 90 | 20 | -21.3 | YP_398639 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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