miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9629641 NC_001829.1 Adeno-associated virus 4

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
6152 - 1257 90 23.5 -20 NP_044926 5' arm      3' arm
6153 - 3893 90 22.5 -23.7 NP_044927 5' arm      3' arm
6151 + 1289 90 21 -23.1 NP_044926 5' arm      3' arm
6150 + 687 90 20 -21 NP_044926 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.