miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9626920 NC_002063.1 Leishmania RNA virus 1 - 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8312 + 241 80 20.5 -21.3 5' arm      3' arm
8313 + 994 90 22.5 -21.6 NP_041190 5' arm      3' arm
8314 - 773 88 22 -21.2 NP_041190 5' arm      3' arm
8315 - 4565 90 19.5 -21.52 NP_041191 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.