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GenBank Identifier | RefSeq Acc. | Name |
56692396 | NC_006558.1 | Getah virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
30976 | + | 842 | 89 | 21.5 | -29.7 | YP_164438 | 5' arm 3' arm | ||
30977 | + | 7345 | 90 | 19.5 | -19.4 | YP_164438 | 5' arm 3' arm | ||
30978 | + | 8216 | 87 | 19 | -19.9 | YP_164439 | 5' arm 3' arm | ||
30979 | - | 316 | 89 | 21 | -19.4 | YP_164438 | 5' arm 3' arm | ||
30980 | - | 1886 | 90 | 25.5 | -20.7 | YP_164438 | 5' arm 3' arm | ||
30981 | - | 2842 | 88 | 19 | -26.7 | YP_164438 | 5' arm 3' arm | ||
30982 | - | 5167 | 89 | 21.5 | -24.6 | YP_164438 | 5' arm 3' arm | ||
30983 | - | 5748 | 86 | 20.5 | -20.6 | YP_164438 | 5' arm 3' arm | ||
30984 | - | 8302 | 87 | 19 | -19.4 | YP_164439 | 5' arm 3' arm | ||
30985 | - | 8894 | 90 | 20 | -20.2 | YP_164439 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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