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GenBank Identifier | RefSeq Acc. | Name |
14141972 | NC_002786.1 | Maize rayado fino virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
10687 | + | 1527 | 88 | 20 | -27 | NP_115454 | 5' arm 3' arm | ||
10688 | + | 1970 | 84 | 20.5 | -21.41 | NP_115454 | 5' arm 3' arm | ||
10689 | - | 1091 | 85 | 21 | -28.5 | NP_115454 | 5' arm 3' arm | ||
10690 | - | 2176 | 88 | 20.5 | -21 | NP_115454 | 5' arm 3' arm | ||
10691 | - | 2506 | 89 | 19 | -27.8 | NP_115454 | 5' arm 3' arm | ||
10692 | - | 4483 | 89 | 21.5 | -33.2 | NP_115454 | 5' arm 3' arm | ||
10693 | - | 4672 | 86 | 20 | -22.4 | NP_115454 | 5' arm 3' arm | ||
10694 | - | 5803 | 89 | 21.5 | -28.8 | NP_115454 | 5' arm 3' arm | ||
10695 | - | 6224 | 89 | 19.5 | -20.7 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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