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| GenBank Identifier | RefSeq Acc. | Name |
| 29502183 | NC_004674.1 | East African cassava mosaic virus DNA A |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 18043 | + | 1620 | 90 | 19.5 | -20.2 | NP_817112 | 5' arm 3' arm | ||
| 18042 | + | 1535 | 84 | 20.5 | -21.1 | NP_817111 | 5' arm 3' arm | ||
| 18045 | + | 1531 | 90 | 23 | -21.8 | NP_817129 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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