miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9632937 NC_000872.1 Streptococcus thermophilus bacteriophage Sfi21

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
824 - 34350 88 23.5 -20.8 NP_050002 5' arm      3' arm
823 - 9042 87 26.5 -25.1 NP_049978 5' arm      3' arm
822 + 12246 88 19 -21.2 NP_049978 5' arm      3' arm
821 + 3074 88 20 -25.8 NP_049969 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.