miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
33112010 NC_005039.1 Yokose virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22226 + 6734 90 25 -28.2 NP_872627 5' arm      3' arm
22227 + 7218 87 24.5 -28.1 NP_872627 5' arm      3' arm
22228 + 9095 90 20.5 -26.6 NP_872627 5' arm      3' arm
22229 + 10766 89 24.5 -29.2 5' arm      3' arm
22230 - 6050 83 21 -24.5 NP_872627 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.