miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
20177455 NC_003635.1 Modoc virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
14909 + 1469 90 22.5 -20.2 NP_619758 5' arm      3' arm
14910 + 4045 90 23 -22.4 NP_619758 5' arm      3' arm
14911 + 6595 90 26.5 -26.4 NP_619758 5' arm      3' arm
14912 + 8926 88 22 -21.9 NP_619758 5' arm      3' arm
14913 + 10512 89 22 -22.5 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.