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GenBank Identifier | RefSeq Acc. | Name |
46393298 | NC_005849.1 | Parietaria mottle virus RNA 2 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
27277 | + | 378 | 88 | 23.5 | -21.1 | YP_006447 | 5' arm 3' arm | ||
27278 | + | 1618 | 89 | 22.5 | -26.2 | YP_006447 | 5' arm 3' arm | ||
27279 | + | 2452 | 89 | 19 | -23.2 | YP_006448 | 5' arm 3' arm | ||
27282 | + | 1638 | 89 | 22 | -24.1 | YP_006464 | 5' arm 3' arm | ||
27281 | + | 657 | 90 | 20 | -25.4 | YP_006463 | 5' arm 3' arm | ||
27283 | - | 1194 | 88 | 19.5 | -26.9 | YP_006463 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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