miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9630733 NC_001946.1 Cherry green ring mottle virus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7534 + 3307 90 21.5 -25.8 NP_047278 5' arm      3' arm
7535 - 113 90 21.5 -24.5 5' arm      3' arm
7536 - 295 87 22 -22.5 NP_047278 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.