miRNA display CGI


Results 1 - 10 of 10 are showing below:
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GenBank Identifier RefSeq Acc. Name
19919937 NC_003502.1 Blackcurrant reversion virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13907 + 974 89 21.5 -28.9 NP_612586 5' arm      3' arm
13908 + 1072 90 21 -23.9 NP_612586 5' arm      3' arm
13909 + 1822 89 21 -22.7 NP_612586 5' arm      3' arm
13910 + 2634 84 19 -20.5 NP_612586 5' arm      3' arm
13911 + 3281 90 20.5 -20.6 NP_612586 5' arm      3' arm
13912 + 3882 82 20.5 -23.1 NP_612586 5' arm      3' arm
13913 - 929 88 19.5 -25 NP_612586 5' arm      3' arm
13914 - 1065 90 20 -24.9 NP_612586 5' arm      3' arm
13922 + 528 88 19 -29.5 NP_612604 5' arm      3' arm
13923 + 4230 88 25 -27.1 NP_612604 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.