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GenBank Identifier | RefSeq Acc. | Name |
9629935 | NC_001874.1 | Rhopalosiphum padi virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
6719 | + | 1749 | 85 | 19.5 | -23.8 | NP_046155 | 5' arm 3' arm | ||
6720 | + | 3152 | 90 | 21 | -24.1 | 5' arm 3' arm | |||
6721 | + | 4654 | 86 | 22.5 | -27.2 | NP_046155 | 5' arm 3' arm | ||
6722 | + | 5262 | 90 | 21 | -22.7 | NP_046155 | 5' arm 3' arm | ||
6723 | + | 5795 | 86 | 20.5 | -27.5 | NP_046155 | 5' arm 3' arm | ||
6724 | + | 6339 | 89 | 23.5 | -22.7 | NP_046155 | 5' arm 3' arm | ||
6725 | + | 8350 | 90 | 19.5 | -27 | NP_046156 | 5' arm 3' arm | ||
6726 | + | 8519 | 87 | 23 | -21.5 | NP_046156 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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