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GenBank Identifier | RefSeq Acc. | Name |
9633550 | NC_000935.1 | Acyrthosiphon pisum bacteriophage APSE-1 |
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ID | strand | start position | length | sRNA loop score | core MFE. |
NP ORF![]() |
Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
1104 | - | 28158 | 87 | 23 | -22.3 | 5' arm 3' arm | |||
1098 | + | 4007 | 89 | 21.5 | -21.4 | NP_050967 | 5' arm 3' arm | ||
1103 | - | 12390 | 84 | 21 | -21.6 | NP_050980 | 5' arm 3' arm | ||
1099 | + | 18183 | 89 | 19.5 | -24 | NP_050993 | 5' arm 3' arm | ||
1100 | + | 20353 | 88 | 21 | -28.3 | NP_050996 | 5' arm 3' arm | ||
1101 | + | 20463 | 79 | 19 | -19.4 | NP_050996 | 5' arm 3' arm | ||
1105 | - | 31537 | 90 | 21 | -25.6 | NP_051006 | 5' arm 3' arm | ||
1102 | + | 34940 | 90 | 22 | -24 | NP_051012 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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