miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
23455823 NC_004306.1 Vibrio cholerae O139 fs1 phage

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16908 + 5526 90 21 -25.1 NP_695202 5' arm      3' arm
16910 - 4735 90 24 -24.6 NP_695201 5' arm      3' arm
16909 - 957 90 26.5 -20.4 NP_695192 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.