miRNA display CGI


Results 1 - 20 of 34 are showing below:
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GenBank Identifier RefSeq Acc. Name
15320657 NC_003083.1 Epiphyas postvittana nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
11312 - 115419 89 20 -22.5 NP_203302 5' arm      3' arm
11311 - 115128 87 21.5 -21.2 NP_203301 5' arm      3' arm
11310 - 109845 89 19.5 -21.1 NP_203297 5' arm      3' arm
11309 - 92092 90 21.5 -25.5 NP_203279 5' arm      3' arm
11308 - 91958 82 23 -25 NP_203279 5' arm      3' arm
11307 - 73830 90 19 -21.1 NP_203257 5' arm      3' arm
11306 - 58512 90 24.5 -20.7 NP_203244 5' arm      3' arm
11305 - 47591 87 22 -26.1 NP_203228 5' arm      3' arm
11304 - 36263 87 21 -22.7 5' arm      3' arm
11303 - 32236 87 25.5 -32.4 NP_203211 5' arm      3' arm
11302 - 28024 89 23.5 -28 NP_203206 5' arm      3' arm
11301 - 24109 90 20 -22.1 NP_203201 5' arm      3' arm
11300 - 22365 88 21 -23.4 NP_203199 5' arm      3' arm
11299 - 19969 90 22.5 -23.8 NP_203195 5' arm      3' arm
11298 - 19080 86 20.5 -28.2 5' arm      3' arm
11297 - 3148 88 19.5 -24.6 NP_203175 5' arm      3' arm
11296 + 114306 89 23.5 -24 NP_203300 5' arm      3' arm
11295 + 109585 90 20 -25 NP_203297 5' arm      3' arm
11294 + 108541 90 19.5 -21.1 NP_203295 5' arm      3' arm
11293 + 105144 90 25 -19.7 NP_203291 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.