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| GenBank Identifier | RefSeq Acc. | Name |
| 15320657 | NC_003083.1 | Epiphyas postvittana nucleopolyhedrovirus |
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| ID | strand | start position | length | sRNA loop score |
core MFE.
|
NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 11303 | - | 32236 | 87 | 25.5 | -32.4 | NP_203211 | 5' arm 3' arm | ||
| 11280 | + | 18992 | 90 | 20.5 | -32.3 | 5' arm 3' arm | |||
| 11283 | + | 43293 | 89 | 23 | -31.7 | NP_203226 | 5' arm 3' arm | ||
| 11284 | + | 51300 | 90 | 24 | -30.1 | NP_203231 | 5' arm 3' arm | ||
| 11298 | - | 19080 | 86 | 20.5 | -28.2 | 5' arm 3' arm | |||
| 11302 | - | 28024 | 89 | 23.5 | -28 | NP_203206 | 5' arm 3' arm | ||
| 11290 | + | 87250 | 89 | 22 | -27.3 | NP_203275 | 5' arm 3' arm | ||
| 11281 | + | 24020 | 90 | 20 | -26.4 | NP_203201 | 5' arm 3' arm | ||
| 11305 | - | 47591 | 87 | 22 | -26.1 | NP_203228 | 5' arm 3' arm | ||
| 11282 | + | 32170 | 90 | 19 | -25.7 | NP_203211 | 5' arm 3' arm | ||
| 11309 | - | 92092 | 90 | 21.5 | -25.5 | NP_203279 | 5' arm 3' arm | ||
| 11308 | - | 91958 | 82 | 23 | -25 | NP_203279 | 5' arm 3' arm | ||
| 11295 | + | 109585 | 90 | 20 | -25 | NP_203297 | 5' arm 3' arm | ||
| 11297 | - | 3148 | 88 | 19.5 | -24.6 | NP_203175 | 5' arm 3' arm | ||
| 11296 | + | 114306 | 89 | 23.5 | -24 | NP_203300 | 5' arm 3' arm | ||
| 11299 | - | 19969 | 90 | 22.5 | -23.8 | NP_203195 | 5' arm 3' arm | ||
| 11289 | + | 73676 | 89 | 23 | -23.4 | NP_203257 | 5' arm 3' arm | ||
| 11300 | - | 22365 | 88 | 21 | -23.4 | NP_203199 | 5' arm 3' arm | ||
| 11287 | + | 57889 | 86 | 20 | -23.3 | NP_203243 | 5' arm 3' arm | ||
| 11291 | + | 89913 | 89 | 22.5 | -23 | NP_203277 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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