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| GenBank Identifier | RefSeq Acc. | Name |
| 15320657 | NC_003083.1 | Epiphyas postvittana nucleopolyhedrovirus |
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| ID | strand | start position | length |
sRNA loop score
|
core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
| 11307 | - | 73830 | 90 | 19 | -21.1 | NP_203257 | 5' arm 3' arm | ||
| 11282 | + | 32170 | 90 | 19 | -25.7 | NP_203211 | 5' arm 3' arm | ||
| 11310 | - | 109845 | 89 | 19.5 | -21.1 | NP_203297 | 5' arm 3' arm | ||
| 11297 | - | 3148 | 88 | 19.5 | -24.6 | NP_203175 | 5' arm 3' arm | ||
| 11294 | + | 108541 | 90 | 19.5 | -21.1 | NP_203295 | 5' arm 3' arm | ||
| 11312 | - | 115419 | 89 | 20 | -22.5 | NP_203302 | 5' arm 3' arm | ||
| 11295 | + | 109585 | 90 | 20 | -25 | NP_203297 | 5' arm 3' arm | ||
| 11301 | - | 24109 | 90 | 20 | -22.1 | NP_203201 | 5' arm 3' arm | ||
| 11287 | + | 57889 | 86 | 20 | -23.3 | NP_203243 | 5' arm 3' arm | ||
| 11281 | + | 24020 | 90 | 20 | -26.4 | NP_203201 | 5' arm 3' arm | ||
| 11280 | + | 18992 | 90 | 20.5 | -32.3 | 5' arm 3' arm | |||
| 11298 | - | 19080 | 86 | 20.5 | -28.2 | 5' arm 3' arm | |||
| 11286 | + | 56817 | 89 | 20.5 | -21.4 | NP_203241 | 5' arm 3' arm | ||
| 11304 | - | 36263 | 87 | 21 | -22.7 | 5' arm 3' arm | |||
| 11292 | + | 100668 | 90 | 21 | -22.6 | NP_203288 | 5' arm 3' arm | ||
| 11300 | - | 22365 | 88 | 21 | -23.4 | NP_203199 | 5' arm 3' arm | ||
| 11311 | - | 115128 | 87 | 21.5 | -21.2 | NP_203301 | 5' arm 3' arm | ||
| 11288 | + | 72849 | 89 | 21.5 | -19.8 | NP_203256 | 5' arm 3' arm | ||
| 11285 | + | 51632 | 90 | 21.5 | -20.1 | NP_203231 | 5' arm 3' arm | ||
| 11309 | - | 92092 | 90 | 21.5 | -25.5 | NP_203279 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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