miRNA display CGI


Results 1 - 20 of 27 are showing below:
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GenBank Identifier RefSeq Acc. Name
17975105 NC_003313.1 Bacteriophage K139

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12297 - 17657 90 22.5 -30.4 NP_536651 5' arm      3' arm
12289 - 8145 89 20 -27.24 5' arm      3' arm
12287 - 4460 88 22.5 -27 NP_536633 5' arm      3' arm
12285 + 17569 87 19.5 -26.3 NP_536651 5' arm      3' arm
12288 - 6585 90 23.5 -26 NP_536638 5' arm      3' arm
12283 + 15338 89 19.5 -25.8 NP_536648 5' arm      3' arm
12284 + 16695 90 21 -25.7 NP_536650 5' arm      3' arm
12281 + 8057 89 19 -25.24 5' arm      3' arm
12299 - 20998 90 19 -25.2 NP_536656 5' arm      3' arm
12302 - 30100 86 22.5 -24.6 NP_536669 5' arm      3' arm
12294 - 11645 89 21.5 -24.3 5' arm      3' arm
12282 + 9900 87 19.5 -24 NP_536641 5' arm      3' arm
12300 - 21689 89 24 -23.71 NP_536658 5' arm      3' arm
12280 + 4559 68 19 -23.6 NP_536633 5' arm      3' arm
12304 - 31018 90 23 -23.5 NP_536670 5' arm      3' arm
12293 - 11514 89 21.5 -22.5 NP_536643 5' arm      3' arm
12298 - 20209 90 19.5 -22.4 NP_536656 5' arm      3' arm
12292 - 10319 89 20.5 -22 NP_536641 5' arm      3' arm
12306 - 32872 87 24.5 -21.5 NP_536671 5' arm      3' arm
12305 - 32431 87 22 -21.5 NP_536671 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.