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GenBank Identifier | RefSeq Acc. | Name |
9635572 | NC_002469.1 | Ovine astrovirus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
8776 | + | 1246 | 90 | 25.5 | -34.4 | NP_059944 | 5' arm 3' arm | ||
8777 | + | 1412 | 90 | 21.5 | -25.72 | NP_059944 | 5' arm 3' arm | ||
8778 | + | 1592 | 87 | 21 | -34.1 | NP_059944 | 5' arm 3' arm | ||
8779 | + | 3968 | 89 | 20 | -22.9 | NP_059945 | 5' arm 3' arm | ||
8780 | + | 4593 | 90 | 25.5 | -25.4 | NP_059946 | 5' arm 3' arm | ||
8781 | + | 4957 | 90 | 21.5 | -20.1 | NP_059946 | 5' arm 3' arm | ||
8782 | + | 6167 | 88 | 23 | -28.1 | NP_059946 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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