miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
19919944 NC_003511.1 Beet virus Q RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
13927 + 1209 90 20 -27.3 NP_612607 5' arm      3' arm
13926 + 1081 89 23 -26.7 NP_612607 5' arm      3' arm
13924 + 3564 85 19 -21.8 NP_612605 5' arm      3' arm
13925 + 836 89 23.5 -21.2 NP_612607 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.