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GenBank Identifier | RefSeq Acc. | Name |
9630643 | NC_001918.1 | Aichi virus |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
7464 | + | 875 | 89 | 24 | -25.8 | NP_047200 | 5' arm 3' arm | ||
7465 | + | 2454 | 88 | 21.5 | -26.4 | NP_047200 | 5' arm 3' arm | ||
7466 | + | 3250 | 83 | 23 | -25.4 | NP_047200 | 5' arm 3' arm | ||
7467 | + | 3519 | 67 | 20.5 | -25.9 | NP_047200 | 5' arm 3' arm | ||
7468 | + | 5150 | 89 | 21.5 | -19.7 | NP_047200 | 5' arm 3' arm | ||
7469 | + | 6407 | 90 | 25 | -31.2 | NP_047200 | 5' arm 3' arm | ||
7470 | + | 6868 | 76 | 21 | -29 | NP_047200 | 5' arm 3' arm | ||
7471 | + | 8143 | 90 | 20 | -20.2 | 5' arm 3' arm | |||
7472 | - | 292 | 90 | 19 | -22.9 | 5' arm 3' arm | |||
7473 | - | 1184 | 80 | 20 | -32.8 | NP_047200 | 5' arm 3' arm | ||
7474 | - | 1801 | 89 | 21.5 | -27.7 | NP_047200 | 5' arm 3' arm | ||
7475 | - | 2079 | 89 | 23.5 | -23.9 | NP_047200 | 5' arm 3' arm | ||
7476 | - | 3347 | 89 | 21 | -22.9 | NP_047200 | 5' arm 3' arm | ||
7477 | - | 3941 | 89 | 21.5 | -29.3 | NP_047200 | 5' arm 3' arm | ||
7478 | - | 5078 | 85 | 21.5 | -22.9 | NP_047200 | 5' arm 3' arm | ||
7479 | - | 5292 | 86 | 19 | -22.1 | NP_047200 | 5' arm 3' arm | ||
7480 | - | 5705 | 89 | 19 | -21.4 | NP_047200 | 5' arm 3' arm | ||
7481 | - | 6750 | 89 | 20.5 | -27.71 | NP_047200 | 5' arm 3' arm | ||
7482 | - | 6947 | 88 | 22.5 | -30 | NP_047200 | 5' arm 3' arm | ||
7483 | - | 7708 | 86 | 19 | -21.7 | NP_047200 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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