miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9632893 NC_000871.1 Streptococcus thermophilus bacteriophage Sfi19

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
820 - 33122 88 23.5 -20.8 NP_049955 5' arm      3' arm
818 - 10627 87 26.5 -27.5 NP_049935 5' arm      3' arm
819 - 12053 90 23 -24.6 NP_049935 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.