miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
21326223 NC_003974.1 Patchouli mild mosaic virus RNA 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
15458 + 915 90 21 -23.9 NP_647591 5' arm      3' arm
15459 + 294 90 21 -24.5 NP_647592 5' arm      3' arm
15460 + 1906 90 20 -22 NP_647592 5' arm      3' arm
15461 - 385 89 24 -27.4 NP_647592 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.