miRNA display CGI

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ID	strand	start position	length	sRNA loop score	core MFE.	NP ORF	Known viral miRNA	Match to own genomic region#	Target prediction with RNAhybrid
7611	+	72	90	19.5	-21.4			5' arm      3' arm
7612	+	751	90	21	-33.6	NP_047559		5' arm      3' arm
7613	+	931	86	19.5	-21.7			5' arm      3' arm
7614	+	1041	90	20	-22.6	NP_047559		5' arm      3' arm
7615	+	1200	90	22.5	-21	NP_047559		5' arm      3' arm
7616	+	1655	85	20.5	-22.4	NP_047559		5' arm      3' arm
7617	+	2024	90	20	-30.1	NP_047559		5' arm      3' arm
7618	+	2667	87	19	-22.5	NP_047560		5' arm      3' arm
7619	+	3463	82	21	-27.4	NP_047560		5' arm      3' arm
7620	+	3555	90	19	-22.9	NP_047560		5' arm      3' arm
7621	-	953	89	20.5	-22.3	NP_047559		5' arm      3' arm
7622	-	1099	86	19	-22.2	NP_047559		5' arm      3' arm
7623	-	1542	89	20.5	-26.7	NP_047559		5' arm      3' arm
7624	-	1803	86	19.5	-22.9	NP_047559		5' arm      3' arm
7625	-	1897	89	20	-25.8	NP_047559		5' arm      3' arm
7626	-	2972	90	19	-20.8	NP_047560		5' arm      3' arm
7627	-	3365	84	20.5	-24.1	NP_047560		5' arm      3' arm
7628	-	3552	86	22	-20.2	NP_047560		5' arm      3' arm
7629	-	4019	88	21	-21.4	NP_047560		5' arm      3' arm
7630	-	4322	89	22.5	-22	NP_047560		5' arm      3' arm

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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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