miRNA display CGI


Results 1 - 20 of 22 are showing below:
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GenBank Identifier RefSeq Acc. Name
9630963 NC_001964.1 Sphaeropsis sapinea RNA virus 2

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
7611 + 72 90 19.5 -21.4 5' arm      3' arm
7612 + 751 90 21 -33.6 NP_047559 5' arm      3' arm
7613 + 931 86 19.5 -21.7 5' arm      3' arm
7614 + 1041 90 20 -22.6 NP_047559 5' arm      3' arm
7615 + 1200 90 22.5 -21 NP_047559 5' arm      3' arm
7616 + 1655 85 20.5 -22.4 NP_047559 5' arm      3' arm
7617 + 2024 90 20 -30.1 NP_047559 5' arm      3' arm
7618 + 2667 87 19 -22.5 NP_047560 5' arm      3' arm
7619 + 3463 82 21 -27.4 NP_047560 5' arm      3' arm
7620 + 3555 90 19 -22.9 NP_047560 5' arm      3' arm
7621 - 953 89 20.5 -22.3 NP_047559 5' arm      3' arm
7622 - 1099 86 19 -22.2 NP_047559 5' arm      3' arm
7623 - 1542 89 20.5 -26.7 NP_047559 5' arm      3' arm
7624 - 1803 86 19.5 -22.9 NP_047559 5' arm      3' arm
7625 - 1897 89 20 -25.8 NP_047559 5' arm      3' arm
7626 - 2972 90 19 -20.8 NP_047560 5' arm      3' arm
7627 - 3365 84 20.5 -24.1 NP_047560 5' arm      3' arm
7628 - 3552 86 22 -20.2 NP_047560 5' arm      3' arm
7629 - 4019 88 21 -21.4 NP_047560 5' arm      3' arm
7630 - 4322 89 22.5 -22 NP_047560 5' arm      3' arm
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* Note: Click the field header to sort on a field. Click it again to reverse the sorted list.
# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.