miRNA display CGI


Results 21 - 40 of 119 are showing below:
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GenBank Identifier RefSeq Acc. Name
58042841 NC_005137.2 Choristoneura fumiferana defective nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22875 + 47747 88 20.5 -23.5 NP_932668 5' arm      3' arm
22876 + 49722 85 22.5 -23.3 NP_932670 5' arm      3' arm
22877 + 51744 89 19.5 -23.5 NP_932670 5' arm      3' arm
22878 + 56561 87 20.5 -20.12 NP_932674 5' arm      3' arm
22879 + 57494 81 22.5 -20.9 NP_932675 5' arm      3' arm
22880 + 60896 90 25.5 -29.4 NP_932682 5' arm      3' arm
22881 + 62988 90 20 -19.5 NP_932686 5' arm      3' arm
22882 + 63696 88 21.5 -25 NP_932687 5' arm      3' arm
22883 + 63977 88 20.5 -22.1 NP_932687 5' arm      3' arm
22884 + 64141 89 19 -25.5 NP_932687 5' arm      3' arm
22885 + 64692 90 19 -29.2 NP_932687 5' arm      3' arm
22886 + 67330 89 20.5 -19.8 NP_932690 5' arm      3' arm
22887 + 68479 88 21 -24 NP_932691 5' arm      3' arm
22888 + 75993 86 21 -22.1 NP_932697 5' arm      3' arm
22889 + 78759 89 21.5 -21.5 NP_932701 5' arm      3' arm
22890 + 80258 89 22 -24.1 NP_932703 5' arm      3' arm
22891 + 84602 90 21 -20 NP_932707 5' arm      3' arm
22892 + 85541 90 22.5 -24.6 NP_932708 5' arm      3' arm
22893 + 88013 89 20 -21.4 NP_932711 5' arm      3' arm
22894 + 89967 79 21 -22.2 NP_932715 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.