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GenBank Identifier | RefSeq Acc. | Name |
34419235 | NC_005083.1 | Bacteriophage KVP40 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
22524 | + | 39262 | 87 | 20 | -21.4 | 5' arm 3' arm | |||
22525 | + | 52344 | 64 | 20 | -24.1 | 5' arm 3' arm | |||
22526 | + | 56519 | 90 | 20 | -21.8 | 5' arm 3' arm | |||
22527 | + | 72877 | 85 | 22.5 | -19.6 | 5' arm 3' arm | |||
22528 | + | 77817 | 89 | 20 | -21 | 5' arm 3' arm | |||
22529 | + | 81623 | 88 | 23.5 | -23.3 | 5' arm 3' arm | |||
22530 | + | 103297 | 89 | 24.5 | -22.5 | 5' arm 3' arm | |||
22531 | + | 106915 | 89 | 22.5 | -22.51 | 5' arm 3' arm | |||
22532 | + | 125942 | 85 | 23 | -21.7 | 5' arm 3' arm | |||
22533 | + | 184051 | 83 | 20.5 | -21.4 | 5' arm 3' arm | |||
22534 | + | 184529 | 89 | 26 | -25.4 | 5' arm 3' arm | |||
22535 | + | 203217 | 86 | 19 | -20.6 | 5' arm 3' arm | |||
22536 | + | 208521 | 89 | 20 | -26.4 | 5' arm 3' arm | |||
22537 | + | 222471 | 90 | 20 | -19.6 | 5' arm 3' arm | |||
22538 | + | 225448 | 90 | 21 | -24.3 | 5' arm 3' arm | |||
22539 | + | 226026 | 90 | 19.5 | -23.1 | 5' arm 3' arm | |||
22540 | - | 27545 | 89 | 19.5 | -22.5 | 5' arm 3' arm | |||
22541 | - | 36415 | 84 | 25 | -28.5 | 5' arm 3' arm | |||
22542 | - | 42888 | 88 | 19.5 | -20.6 | 5' arm 3' arm | |||
22543 | - | 51457 | 88 | 25.5 | -23.2 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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