miRNA display CGI


Results 1 - 20 of 26 are showing below:
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GenBank Identifier RefSeq Acc. Name
34419235 NC_005083.1 Bacteriophage KVP40

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
22524 + 39262 87 20 -21.4 5' arm      3' arm
22525 + 52344 64 20 -24.1 5' arm      3' arm
22526 + 56519 90 20 -21.8 5' arm      3' arm
22527 + 72877 85 22.5 -19.6 5' arm      3' arm
22528 + 77817 89 20 -21 5' arm      3' arm
22529 + 81623 88 23.5 -23.3 5' arm      3' arm
22530 + 103297 89 24.5 -22.5 5' arm      3' arm
22531 + 106915 89 22.5 -22.51 5' arm      3' arm
22532 + 125942 85 23 -21.7 5' arm      3' arm
22533 + 184051 83 20.5 -21.4 5' arm      3' arm
22534 + 184529 89 26 -25.4 5' arm      3' arm
22535 + 203217 86 19 -20.6 5' arm      3' arm
22536 + 208521 89 20 -26.4 5' arm      3' arm
22537 + 222471 90 20 -19.6 5' arm      3' arm
22538 + 225448 90 21 -24.3 5' arm      3' arm
22539 + 226026 90 19.5 -23.1 5' arm      3' arm
22540 - 27545 89 19.5 -22.5 5' arm      3' arm
22541 - 36415 84 25 -28.5 5' arm      3' arm
22542 - 42888 88 19.5 -20.6 5' arm      3' arm
22543 - 51457 88 25.5 -23.2 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.