miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
9635438 NC_002350.1 Wheat yellow mosaic virus RNA 1

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
8744 - 6592 87 21 -22.7 NP_059449 5' arm      3' arm
8742 + 5514 89 19 -21.4 NP_059449 5' arm      3' arm
8741 - 2803 88 19.5 -20.7 NP_059448 5' arm      3' arm
8743 - 245 83 19.5 -19.6 NP_059449 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.