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GenBank Identifier | RefSeq Acc. | Name |
9630525 | NC_001902.1 | Methanobacterium phage psiM2 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
7445 | - | 26049 | 80 | 19 | -29.7 | 5' arm 3' arm | |||
7444 | - | 25694 | 84 | 23.5 | -36.2 | NP_046986 | 5' arm 3' arm | ||
7443 | - | 19017 | 90 | 20.5 | -23.5 | NP_046978 | 5' arm 3' arm | ||
7442 | - | 18389 | 89 | 21 | -25.9 | NP_046977 | 5' arm 3' arm | ||
7441 | - | 11304 | 89 | 20 | -20.6 | NP_046969 | 5' arm 3' arm | ||
7440 | - | 8591 | 86 | 25 | -28.6 | NP_046966 | 5' arm 3' arm | ||
7439 | - | 2808 | 90 | 30 | -23.3 | 5' arm 3' arm | |||
7438 | + | 24975 | 88 | 20.5 | -22.9 | 5' arm 3' arm | |||
7437 | + | 21997 | 89 | 21.5 | -27.8 | NP_046982 | 5' arm 3' arm | ||
7436 | + | 21658 | 89 | 21 | -23 | NP_046981 | 5' arm 3' arm | ||
7435 | + | 19425 | 88 | 23 | -25.4 | NP_046978 | 5' arm 3' arm | ||
7434 | + | 6147 | 88 | 21 | -22 | NP_046964 | 5' arm 3' arm | ||
7433 | + | 6048 | 78 | 19 | -25.4 | NP_046964 | 5' arm 3' arm | ||
7432 | + | 3564 | 86 | 19 | -19.5 | NP_046961 | 5' arm 3' arm | ||
7431 | + | 940 | 89 | 22 | -27.4 | NP_597860 | 5' arm 3' arm | ||
7430 | + | 67 | 90 | 23.5 | -27.1 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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