miRNA display CGI


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GenBank Identifier RefSeq Acc. Name
18254496 NC_003355.1 Crucifer tobamovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
12715 + 5929 87 21.5 -23.9 NP_543052 5' arm      3' arm
12714 + 5821 85 19.5 -22 NP_543052 5' arm      3' arm
12716 - 5766 86 22 -21.3 NP_543052 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.