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GenBank Identifier | RefSeq Acc. | Name |
30315616 | NC_004761.1 | Human papillomavirus RTRX7 |
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ID | strand | start position | length | sRNA loop score | core MFE. | NP ORF | Known viral miRNA | Match to own genomic region# | Target prediction with RNAhybrid |
21103 | + | 3737 | 89 | 19 | -21.4 | NP_847994 | 5' arm 3' arm | ||
21104 | + | 4514 | 86 | 20.5 | -26.5 | NP_847995 | 5' arm 3' arm | ||
21105 | - | 3561 | 89 | 23 | -20.5 | NP_847994 | 5' arm 3' arm | ||
21106 | - | 3758 | 89 | 22.5 | -21.1 | NP_847994 | 5' arm 3' arm | ||
21107 | - | 5128 | 87 | 21.5 | -21.1 | NP_847995 | 5' arm 3' arm |
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.
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