miRNA display CGI


Results 1 - 20 of 20 are showing below:
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GenBank Identifier RefSeq Acc. Name
23577820 NC_004323.1 Rachiplusia ou multiple nucleopolyhedrovirus

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
16968 + 984 90 22 -22 NP_702994 5' arm      3' arm
16977 + 129625 90 20.5 -22 NP_703138 5' arm      3' arm
16976 + 106991 90 21 -20.6 NP_703115 5' arm      3' arm
16975 + 99053 89 20 -21.09 NP_703107 5' arm      3' arm
16974 + 90690 82 21.5 -20.5 NP_703095 5' arm      3' arm
16973 + 85872 90 22.5 -24.8 NP_703091 5' arm      3' arm
16972 + 64843 90 22.5 -22 NP_703070 5' arm      3' arm
16971 + 61972 83 21.5 -20 NP_703067 5' arm      3' arm
16970 + 57362 90 22 -26.21 NP_703058 5' arm      3' arm
16969 + 14989 89 21 -24.1 NP_703011 5' arm      3' arm
16979 - 28463 89 20.5 -27.1 NP_703027 5' arm      3' arm
16980 - 32370 89 20.5 -21.3 NP_703032 5' arm      3' arm
16982 - 38778 84 20.5 -23.9 NP_703040 5' arm      3' arm
16981 - 38483 90 22 -21.6 NP_703039 5' arm      3' arm
16983 - 63967 83 19.5 -21.1 NP_703070 5' arm      3' arm
16984 - 97329 86 20.5 -19.6 NP_703103 5' arm      3' arm
16985 - 107937 87 23 -25 NP_703116 5' arm      3' arm
16986 - 118502 87 19.5 -21.2 NP_703125 5' arm      3' arm
16987 - 122609 89 19.5 -25.1 NP_703129 5' arm      3' arm
16978 - 21196 80 25 -22.4 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.