miRNA display CGI


Results 1 - 9 of 9 are showing below:
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GenBank Identifier RefSeq Acc. Name
51593836 NC_006152.1 Adeno-associated virus 5

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ID strand start position length sRNA loop score core MFE. NP ORF Known viral miRNA Match to own genomic region# Target prediction with RNAhybrid
29651 + 430 88 23 -19.9 YP_068408 5' arm      3' arm
29652 + 1604 89 19.5 -21.7 YP_068408 5' arm      3' arm
29653 + 3990 89 19 -22.6 YP_068409 5' arm      3' arm
29657 - 3809 90 25.5 -25.2 YP_068409 5' arm      3' arm
29656 - 2722 89 24 -28.4 YP_068409 5' arm      3' arm
29658 - 3901 87 22.5 -21.3 YP_068409 5' arm      3' arm
29655 - 2506 87 22 -21.7 YP_068409 5' arm      3' arm
29659 - 4149 88 21.5 -20.2 YP_068409 5' arm      3' arm
29654 - 1178 86 20 -24.9 YP_068408 5' arm      3' arm
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# Note: We used the same viral genomic sequence for potential target identification for viral miRNAs. It is likely that viral miRNA could serve as a self-mediated feedback regulation.

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TDL, Institute of Biomedical Science, Academia Sinica, Taipei, Taiwan.
Copyright © 2007 TDL. All rights reserved.